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1

Boolean Models Can Explain Bistability in the lac Operon

Veliz-Cuba, Alan, Stigler, Brandilyn

Journal:

Journal of Computational Biology

Year:

2011

Language:

english

File:

PDF, 354 KB

english, 2011

2

A computational algebra approach to the reverse engineering of gene regulatory networks

Reinhard Laubenbacher, Brandilyn Stigler

Journal:

Journal of Theoretical Biology

Year:

2004

Language:

english

File:

PDF, 345 KB

english, 2004

3

Computing Gröbner bases of ideals of few points in high dimensions

Just, Winfried, Stigler, Brandilyn

Journal:

ACM Communications in Computer Algebra

Year:

2006

Language:

english

File:

PDF, 267 KB

english, 2006

4

Parameter estimation for Boolean models of biological networks

Elena Dimitrova, Luis David García-Puente, Franziska Hinkelmann, Abdul S. Jarrah, Reinhard Laubenbacher, Brandilyn Stigler, Michael Stillman, Paola Vera-Licona

Journal:

Theoretical Computer Science

Year:

2011

Language:

english

File:

PDF, 398 KB

english, 2011

5

[ACM Press the 2007 international symposium - Waterloo, Ontario, Canada (2007.07.29-2007.08.01)] Proceedings of the 2007 international symposium on Symbolic and algebraic computation - ISSAC '07 - A Gröbner fan method for biochemical network modeling

Dimitrova, Elena S., Jarrah, Abdul Salam, Laubenbacher, Reinhard, Stigler, Brandilyn

Year:

2007

Language:

english

File:

PDF, 193 KB

english, 2007

6

Geometric Characterization of Data Sets with Unique Reduced Gröbner Bases

He, Qijun, Dimitrova, Elena S., Stigler, Brandilyn, Zhang, Anyu

Journal:

Bulletin of Mathematical Biology

Year:

2019

File:

PDF, 454 KB

2019

7

Small Grobner Fans of Ideals of Points

Dimitrova, Elena, He, Qijun, Robbiano, Lorenzo, Stigler, Brandilyn

Journal:

Journal of Algebra and Its Applications

Year:

2019

Language:

english

File:

PDF, 491 KB

english, 2019

8

Reverse-engineering of polynomial dynamical systems

Abdul Salam Jarrah, Reinhard Laubenbacher, Brandilyn Stigler, Michael Stillman

Journal:

Advances in Applied Mathematics

Year:

2007

Language:

english

File:

PDF, 159 KB

english, 2007

9

System Identification for Discrete Polynomial Models of Gene Regulatory Networks

Laubenbacher, Reinhard, Jarrah, Abdul, Dimitrova, Elena, Stigler, Brandilyn, Vera-Licona, Paola

Journal:

IFAC Proceedings Volumes

Year:

2009

Language:

english

File:

PDF, 191 KB

english, 2009

10

Geometric Characterization of Data Sets with Unique Reduced Gröbner Bases

He, Qijun, Dimitrova, Elena S., Stigler, Brandilyn, Zhang, Anyu

Journal:

Bulletin of Mathematical Biology

Year:

2019

Language:

english

File:

PDF, 454 KB

english, 2019

11

Data Identification for Improving Gene Network Inference using Computational Algebra

Dimitrova, Elena, Stigler, Brandilyn

Journal:

Bulletin of Mathematical Biology

Year:

2014

Language:

english

File:

PDF, 625 KB

english, 2014

12

A regulatory network modeled from wild-type gene expression data guides functional predictions inCaenorhabditis elegansdevelopment

Brandilyn Stigler, Helen M Chamberlin

Journal:

BMC Systems Biology

Year:

2012

Language:

english

File:

PDF, 894 KB

english, 2012

13

Mathematical Concepts and Methods in Modern Biology || Inferring the Topology of Gene Regulatory Networks: An Algebraic Approach to Reverse Engineering

Stigler, Brandilyn

Year:

2013

Language:

english

File:

PDF, 424 KB

english, 2013

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